Rice miRNA stats - exactly matching data | Run # 1 (SID292) | Run # 2 (SID618) | |||||
Set # 1 | Set # 2 | Set # 1 | Set # 2 | Set # 3 | |||
miRNA | Size | Sequence | Aerial plus polysome (12,306) | Leaves and Seedlings (8,068) | Adult whole plant (29,480) | Stress (28,063) | Kinase treatment (20,203) |
osa-miR156abcdefghij | 20mer | TGACAGAAGAGAGTGAGCAC | 67.4 | 49.5 | 3 | 5.7 | 1.9 |
osa-miR156k | 21mer | TGACAGAAGAGAGAGAGCACA | 0 | 0 | 0 | 0 | 0 |
osa-miR156l | 21mer | CGACAGAAGAGAGTGAGCATA | 0 | 0 | 0 | 0 | 0 |
osa-miR159ab | 21mer | TTTGGATTGAAGGGAGCTCTG | 35.7 | 143.7 | 14.9 | 66.9 | 22.7 |
osa-miR159c | 21mer | ATTGGATTGAAGGGAGCTCCA | 0 | 0 | 0 | 0 | 0 |
osa-miR159d | 21mer | ATTGGATTGAAGGGAGCTCCG | 0 | 0 | 0 | 0 | 0 |
osa-miR159e | 21mer | ATTGGATTGAAGGGAGCTCCT | 0 | 0 | 0 | 0 | 0 |
osa-miR159f | 21mer | CTTGGATTGAAGGGAGCTCTA | 0 | 0 | 0 | 0 | 0 |
osa-miR160abcd | 21mer | TGCCTGGCTCCCTGTATGCCA | 75.5 | 61.9 | 26.1 | 21 | 8.4 |
osa-miR160e | 21mer | TGCCTGGCTCCCTGTATGCCG | 40.6 | 39.6 | 43 | 17.4 | 4.4 |
osa-miR160f | 21mer | TGCCTGGCTCCCTGAATGCCA | 18.6 | 13.6 | 0 | 2.8 | 0 |
osa-miR162a | 21mer | TCGATAAACCTCTGCATCCAG | 0 | 3.7 | 0.3 | 0.3 | 0.4 |
osa-miR162b | 21mer | TCGATAAGCCTCTGCATCCAG | 0 | 2.4 | 1 | 0.7 | 0.4 |
osa-miR164abf | 21mer | TGGAGAAGCAGGGCACGTGCA | 448.5 | 187.1 | 75.6 | 35.9 | 35.6 |
osa-miR164c | 21mer | TGGAGAAGCAGGGTACGTGCA | 0.8 | 0 | 1.3 | 0.3 | 0 |
osa-miR164d | 21mer | TGGAGAAGCAGGGCACGTGCT | 2.4 | 0 | 1.3 | 0 | 0 |
osa-miR164e | 21mer | TGGAGAAGCAGGGCACGTGAG | 1.6 | 1.2 | 0 | 0.7 | 0 |
osa-miR166abcdefn | 21mer | TCGGACCAGGCTTCATTCCCC | 196.6 | 172.2 | 26.1 | 6.7 | 3.9 |
osa-miR166gh | 21mer | TCGGACCAGGCTTCATTCCTC | 9.7 | 3.7 | 3.3 | 1.4 | 0 |
osa-miR166ij | 21mer | TCGGATCAGGCTTCATTCCTC | 0 | 0 | 0 | 0 | 0 |
osa-miR166kl | 21mer | TCGGACCAGGCTTCAATCCCT | 2.4 | 18.5 | 1.6 | 0.3 | 0 |
osa-miR166m | 21mer | TCGGACCAGGCTTCATTCCCT | 0 | 0 | 0 | 0 | 0 |
osa-miR167abc | 21mer | TGAAGCTGCCAGCATGATCTA | 23.5 | 54.5 | 14.9 | 19.5 | 6.4 |
osa-miR167defghij | 21mer | TGAAGCTGCCAGCATGATCTG | 95 | 132.6 | 48.5 | 23.8 | 19.7 |
osa-miR168a | 21mer | TCGCTTGGTGCAGATCGGGAC | 1071.8 | 1059.7 | 457.5 | 320.3 | 153.4 |
osa-miR168b | 21mer | AGGCTTGGTGCAGCTCGGGAA | 0 | 0 | 0 | 0 | 0 |
osa-miR169a | 21mer | CAGCCAAGGATGACTTGCCGA | 0 | 12.3 | 4 | 3.5 | 3.4 |
osa-miR169bc | 21mer | CAGCCAAGGATGACTTGCCGG | 10.5 | 33.4 | 12.8 | 8.5 | 3.4 |
osa-miR169d | 21mer | TAGCCAAGGATGAATTGCCGG | 0 | 0 | 0 | 0 | 0 |
osa-miR169e | 21mer | TAGCCAAGGATGACTTGCCGG | 0 | 0 | 0.3 | 0 | 0 |
osa-miR169fg | 21mer | TAGCCAAGGATGACTTGCCTA | 47.9 | 899.8 | 78 | 177.8 | 129.1 |
osa-miR169hijklm | 21mer | TAGCCAAGGATGACTTGCCTG | 89.3 | 727.5 | 26.1 | 100.8 | 50.4 |
osa-miR169no | 21mer | TAGCCAAGAATGACTTGCCTA | 78.8 | 442.4 | 46.8 | 83 | 72.7 |
osa-miR169p | 22mer | TAGCCAAGGACAAACTTGCCGG | 0 | 0 | 0 | 0 | 0 |
osa-miR169q | 21mer | TAGCCAAGGAGACTGCCCATG | 0 | 0 | 0 | 0 | 0 |
osa-miR171a | 21mer | TGATTGAGCCGCGCCAATATC | 6.5 | 0 | 0 | 0.3 | 0 |
osa-miR171bcdef | 21mer | TGATTGAGCCGTGCCAATATC | 57.6 | 485.8 | 56.9 | 104.4 | 14.3 |
osa-miR171g | 21mer | GAGGTGAGCCGAGCCAATATC | 0 | 0 | 0 | 0 | 0 |
osa-miR171h | 21mer | GTGAGCCGAACCAATATCACT | 0 | 0 | 0 | 0 | 0 |
osa-miR171i | 21mer | GGATTGAGCCGCGTCAATATC | 0 | 0 | 0 | 0 | 0 |
osa-miR172ad | 21mer | AGAATCTTGATGATGCTGCAT | 71.5 | 74.3 | 27.8 | 16.3 | 7.4 |
osa-miR172b | 21mer | GGAATCTTGATGATGCTGCAT | 0 | 0 | 2.7 | 0 | 1.9 |
osa-miR172c | 21mer | TGAATCTTGATGATGCTGCAC | 0 | 0 | 0 | 0.3 | 0 |
osa-miR319ab | 20mer | TTGGACTGAAGGGTGCTCCC | 0 | 3.7 | 0 | 0 | 0 |
osa-miR390 | 21mer | AAGCTCAGGAGGGATAGCGCC | 0.8 | 2.4 | 1 | 2.8 | 0 |
osa-miR393 | 21mer | TCCAAAGGGATCGCATTGATC | 3.2 | 1.2 | 0.6 | 0.7 | 0 |
osa-miR393b | 22mer | TCCAAAGGGATCGCATTGATCT | 0 | 0 | 0 | 0 | 0 |
osa-miR394 | 20mer | TTGGCATTCTGTCCACCTCC | 0.8 | 6.1 | 0 | 0.3 | 0.4 |
osa-miR395a | 21mer | GTGAAGTATTTGGGGGAACTC | 0 | 0 | 0 | 0 | 0 |
osa-miR395bdeghijklm | 21mer | GTGAAGTGTTTGGGGGAACTC | 0 | 0 | 0 | 0 | 0 |
osa-miR395c | 21mer | GTGAAGTGCTTGGGGGAACTC | 0 | 0 | 0 | 0 | 0 |
osa-miR395fps | 21mer | GTGAAGCGTTTGGGGGAAATC | 0 | 0 | 0 | 0 | 0 |
osa-miR395nor | 21mer | GTGAAGTGTTTGGGGAAACTC | 0 | 0 | 0 | 0 | 0 |
osa-miR395q | 21mer | GTGAAGTGTTTGGAGGAACTC | 0 | 0 | 0 | 0 | 0 |
osa-miR396ab | 21mer | TTCCACAGCTTTCTTGAACTG | 0 | 0 | 0 | 0 | 0 |
osa-miR396c | 21mer | TTCCACAGCTTTCTTGAACTT | 0 | 1.2 | 0.3 | 0.7 | 0.9 |
osa-miR396de | 21mer | TCCACAGGCTTTCTTGAACTG | 356.7 | 281.3 | 58.6 | 14.6 | 15.3 |
osa-miR397a | 21mer | TCATTGAGTGCAGCGTTGATG | 17 | 9.9 | 7.8 | 2.1 | 4.9 |
osa-miR397b | 21mer | TTATTGAGTGCAGCGTTGATG | 0 | 0 | 0 | 0 | 0 |
osa-miR398a | 21mer | TGTGTTCTCAGGTCACCCCTT | 0.8 | 2.4 | 0 | 0 | 0.4 |
osa-miR398b | 21mer | TGTGTTCTCAGGTCGCCCCTG | 8.1 | 2.4 | 0 | 0 | 0.9 |
osa-miR399abc | 21mer | TGCCAAAGGAGAATTGCCCTG | 0 | 0 | 0.3 | 0 | 0 |
osa-miR399d | 21mer | TGCCAAAGGAGAGTTGCCCTG | 5.6 | 0 | 0.3 | 0.7 | 0 |
osa-miR399ef | 21mer | TGCCAAAGGAGATTTGCCCAG | 0 | 0 | 0 | 0 | 0 |
osa-miR399g | 21mer | TGCCAAAGGAGATTTGCCCGG | 0 | 0 | 0 | 0 | 0 |
osa-miR399h | 21mer | TGCCAAAGGAGACTTGCCCAG | 0 | 0 | 0 | 0 | 0 |
osa-miR399i | 21mer | TGCCAAAGGAGAGCTGCCCTG | 0 | 0 | 0 | 0 | 0 |
osa-miR399j | 21mer | TGCCAAAGGAGAGTTGCCCTA | 2.4 | 1.2 | 1 | 0 | 0 |
osa-miR399k | 21mer | TGCCAAAGGAAATTTGCCCCG | 0 | 0 | 0.3 | 0 | 0.4 |
osa-miR408 | 21mer | CTGCACTGCCTCTTCCCTGGC | 121.8 | 45.8 | 0.6 | 0 | 2.9 |
osa-miR413 | 21mer | CTAGTTTCACTTGTTCTGCAC | 0 | 0 | 0 | 0 | 0 |
osa-miR414 | 21mer | TCATCCTCATCATCATCGTCC | 0 | 0 | 0 | 0 | 0 |
osa-miR415 | 21mer | AACAGAACAGAAGCAGAGCAG | 0 | 0 | 0 | 0 | 0 |
osa-miR416 | 21mer | TGTTCGTCCGTACACTGTTCA | 0 | 0 | 0 | 0 | 0 |
osa-miR417 | 21mer | GAATGTAGTGAATTTGTTCCA | 0 | 0 | 0 | 0 | 0 |
osa-miR418 | 21mer | TAATGTGATGATGAAATGACG | 0 | 0 | 0 | 0 | 0 |
osa-miR419 | 21mer | TGATGAATGCTGACGATGTTG | 0 | 0 | 0 | 0 | 0 |
osa-miR420 | 21mer | TAAATTAATCACGGAAATGAT | 0 | 0 | 0 | 0 | 0 |
osa-miR426 | 21mer | TTTTGGAAGTTTGTCCTTACG | 0 | 0 | 0 | 0 | 0 |
osa-miR435 | 20mer | TTATCCGGTATTGGAGTTGA | 0.8 | 7.4 | 0 | 0.3 | 0 |
osa-miR437 | 21mer | AAAGTTAGAGAAGTTTGACTT | 0 | 0 | 0 | 0 | 0 |
osa-miR438 | 21mer | TTCCCACGCGTTATAGTGAAA | 0 | 0 | 0 | 0 | 0 |
osa-miR439abcdefghij | 21mer | TGTCGAACCGCGGTTGTTCGA | 0 | 0 | 0 | 0 | 0 |
osa-miR440 | 24mer | AGTGTCTCCTGATGATCGGGACAA | 0 | 0 | 0 | 0.7 | 2.4 |
osa-miR441abc | 24mer | TACCATCAATATAAATGTGGGAAA | 0 | 0 | 0 | 0 | 0 |
osa-miR442 | 24mer | TGACGTGTAAATTGCGAGACGAAT | 0 | 0 | 0 | 0 | 0 |
osa-miR443 | 22mer | ATCACAATACAATAAATCTGGA | 0 | 0 | 0 | 0 | 0 |
osa-miR444 | 21mer | TTGCTGCCTCAAGCTTGCTGC | 0 | 0 | 0 | 0 | 0 |
osa-miR445abcdefghi | 24mer | TAAATTAGTGTATAAACATCCGAT | 0 | 0 | 0 | 0 | 0 |
osa-miR446 | 24mer | CATCAATATGAATATGGGAAATGG | 0 | 0 | 0 | 0 | 0 |
osa-miR528 | 21mer | TGGAAGGGGCATGCAGAGGAG | 199.9 | 210.7 | 18.3 | 3.2 | 32.6 |
osa-miR529 | 20mer | CTGTACCCTCTCTCTTCTTC | 0 | 0 | 0 | 0 | 0 |
osa-miR530 | 21mer | AGGTGCAGAGGCAGATGCAAC | 52 | 161.1 | 11.8 | 6 | 31.6 |
osa-miR531 | 24mer | CTCGCCGGGGCTGCGTGCCGCCAT | 0 | 0 | 0 | 0.3 | 0 |
osa-miR535 | 21mer | TGACAACGAGAGAGAGCACGC | 0.8 | 0 | 2.3 | 1.4 | 2.4 |