Library miRNA frequencies

Sequence count normalized for a unique-sequence-library size of 10,000 smRNAs

Rice miRNA stats - exactly matching data			Run # 1 (SID292)		Run # 2 (SID618)
Rice miRNA stats - exactly matching data			Set # 1	Set # 2	Set # 1	Set # 2	Set # 3
miRNA	Size	Sequence	Aerial plus polysome (12,306)	Leaves and Seedlings (8,068)	Adult whole plant (29,480)	Stress (28,063)	Kinase treatment (20,203)
osa-miR156abcdefghij	20mer	TGACAGAAGAGAGTGAGCAC	67.4	49.5	3	5.7	1.9
osa-miR156k	21mer	TGACAGAAGAGAGAGAGCACA	0	0	0	0	0
osa-miR156l	21mer	CGACAGAAGAGAGTGAGCATA	0	0	0	0	0
osa-miR159ab	21mer	TTTGGATTGAAGGGAGCTCTG	35.7	143.7	14.9	66.9	22.7
osa-miR159c	21mer	ATTGGATTGAAGGGAGCTCCA	0	0	0	0	0
osa-miR159d	21mer	ATTGGATTGAAGGGAGCTCCG	0	0	0	0	0
osa-miR159e	21mer	ATTGGATTGAAGGGAGCTCCT	0	0	0	0	0
osa-miR159f	21mer	CTTGGATTGAAGGGAGCTCTA	0	0	0	0	0
osa-miR160abcd	21mer	TGCCTGGCTCCCTGTATGCCA	75.5	61.9	26.1	21	8.4
osa-miR160e	21mer	TGCCTGGCTCCCTGTATGCCG	40.6	39.6	43	17.4	4.4
osa-miR160f	21mer	TGCCTGGCTCCCTGAATGCCA	18.6	13.6	0	2.8	0
osa-miR162a	21mer	TCGATAAACCTCTGCATCCAG	0	3.7	0.3	0.3	0.4
osa-miR162b	21mer	TCGATAAGCCTCTGCATCCAG	0	2.4	1	0.7	0.4
osa-miR164abf	21mer	TGGAGAAGCAGGGCACGTGCA	448.5	187.1	75.6	35.9	35.6
osa-miR164c	21mer	TGGAGAAGCAGGGTACGTGCA	0.8	0	1.3	0.3	0
osa-miR164d	21mer	TGGAGAAGCAGGGCACGTGCT	2.4	0	1.3	0	0
osa-miR164e	21mer	TGGAGAAGCAGGGCACGTGAG	1.6	1.2	0	0.7	0
osa-miR166abcdefn	21mer	TCGGACCAGGCTTCATTCCCC	196.6	172.2	26.1	6.7	3.9
osa-miR166gh	21mer	TCGGACCAGGCTTCATTCCTC	9.7	3.7	3.3	1.4	0
osa-miR166ij	21mer	TCGGATCAGGCTTCATTCCTC	0	0	0	0	0
osa-miR166kl	21mer	TCGGACCAGGCTTCAATCCCT	2.4	18.5	1.6	0.3	0
osa-miR166m	21mer	TCGGACCAGGCTTCATTCCCT	0	0	0	0	0
osa-miR167abc	21mer	TGAAGCTGCCAGCATGATCTA	23.5	54.5	14.9	19.5	6.4
osa-miR167defghij	21mer	TGAAGCTGCCAGCATGATCTG	95	132.6	48.5	23.8	19.7
osa-miR168a	21mer	TCGCTTGGTGCAGATCGGGAC	1071.8	1059.7	457.5	320.3	153.4
osa-miR168b	21mer	AGGCTTGGTGCAGCTCGGGAA	0	0	0	0	0
osa-miR169a	21mer	CAGCCAAGGATGACTTGCCGA	0	12.3	4	3.5	3.4
osa-miR169bc	21mer	CAGCCAAGGATGACTTGCCGG	10.5	33.4	12.8	8.5	3.4
osa-miR169d	21mer	TAGCCAAGGATGAATTGCCGG	0	0	0	0	0
osa-miR169e	21mer	TAGCCAAGGATGACTTGCCGG	0	0	0.3	0	0
osa-miR169fg	21mer	TAGCCAAGGATGACTTGCCTA	47.9	899.8	78	177.8	129.1
osa-miR169hijklm	21mer	TAGCCAAGGATGACTTGCCTG	89.3	727.5	26.1	100.8	50.4
osa-miR169no	21mer	TAGCCAAGAATGACTTGCCTA	78.8	442.4	46.8	83	72.7
osa-miR169p	22mer	TAGCCAAGGACAAACTTGCCGG	0	0	0	0	0
osa-miR169q	21mer	TAGCCAAGGAGACTGCCCATG	0	0	0	0	0
osa-miR171a	21mer	TGATTGAGCCGCGCCAATATC	6.5	0	0	0.3	0
osa-miR171bcdef	21mer	TGATTGAGCCGTGCCAATATC	57.6	485.8	56.9	104.4	14.3
osa-miR171g	21mer	GAGGTGAGCCGAGCCAATATC	0	0	0	0	0
osa-miR171h	21mer	GTGAGCCGAACCAATATCACT	0	0	0	0	0
osa-miR171i	21mer	GGATTGAGCCGCGTCAATATC	0	0	0	0	0
osa-miR172ad	21mer	AGAATCTTGATGATGCTGCAT	71.5	74.3	27.8	16.3	7.4
osa-miR172b	21mer	GGAATCTTGATGATGCTGCAT	0	0	2.7	0	1.9
osa-miR172c	21mer	TGAATCTTGATGATGCTGCAC	0	0	0	0.3	0
osa-miR319ab	20mer	TTGGACTGAAGGGTGCTCCC	0	3.7	0	0	0
osa-miR390	21mer	AAGCTCAGGAGGGATAGCGCC	0.8	2.4	1	2.8	0
osa-miR393	21mer	TCCAAAGGGATCGCATTGATC	3.2	1.2	0.6	0.7	0
osa-miR393b	22mer	TCCAAAGGGATCGCATTGATCT	0	0	0	0	0
osa-miR394	20mer	TTGGCATTCTGTCCACCTCC	0.8	6.1	0	0.3	0.4
osa-miR395a	21mer	GTGAAGTATTTGGGGGAACTC	0	0	0	0	0
osa-miR395bdeghijklm	21mer	GTGAAGTGTTTGGGGGAACTC	0	0	0	0	0
osa-miR395c	21mer	GTGAAGTGCTTGGGGGAACTC	0	0	0	0	0
osa-miR395fps	21mer	GTGAAGCGTTTGGGGGAAATC	0	0	0	0	0
osa-miR395nor	21mer	GTGAAGTGTTTGGGGAAACTC	0	0	0	0	0
osa-miR395q	21mer	GTGAAGTGTTTGGAGGAACTC	0	0	0	0	0
osa-miR396ab	21mer	TTCCACAGCTTTCTTGAACTG	0	0	0	0	0
osa-miR396c	21mer	TTCCACAGCTTTCTTGAACTT	0	1.2	0.3	0.7	0.9
osa-miR396de	21mer	TCCACAGGCTTTCTTGAACTG	356.7	281.3	58.6	14.6	15.3
osa-miR397a	21mer	TCATTGAGTGCAGCGTTGATG	17	9.9	7.8	2.1	4.9
osa-miR397b	21mer	TTATTGAGTGCAGCGTTGATG	0	0	0	0	0
osa-miR398a	21mer	TGTGTTCTCAGGTCACCCCTT	0.8	2.4	0	0	0.4
osa-miR398b	21mer	TGTGTTCTCAGGTCGCCCCTG	8.1	2.4	0	0	0.9
osa-miR399abc	21mer	TGCCAAAGGAGAATTGCCCTG	0	0	0.3	0	0
osa-miR399d	21mer	TGCCAAAGGAGAGTTGCCCTG	5.6	0	0.3	0.7	0
osa-miR399ef	21mer	TGCCAAAGGAGATTTGCCCAG	0	0	0	0	0
osa-miR399g	21mer	TGCCAAAGGAGATTTGCCCGG	0	0	0	0	0
osa-miR399h	21mer	TGCCAAAGGAGACTTGCCCAG	0	0	0	0	0
osa-miR399i	21mer	TGCCAAAGGAGAGCTGCCCTG	0	0	0	0	0
osa-miR399j	21mer	TGCCAAAGGAGAGTTGCCCTA	2.4	1.2	1	0	0
osa-miR399k	21mer	TGCCAAAGGAAATTTGCCCCG	0	0	0.3	0	0.4
osa-miR408	21mer	CTGCACTGCCTCTTCCCTGGC	121.8	45.8	0.6	0	2.9
osa-miR413	21mer	CTAGTTTCACTTGTTCTGCAC	0	0	0	0	0
osa-miR414	21mer	TCATCCTCATCATCATCGTCC	0	0	0	0	0
osa-miR415	21mer	AACAGAACAGAAGCAGAGCAG	0	0	0	0	0
osa-miR416	21mer	TGTTCGTCCGTACACTGTTCA	0	0	0	0	0
osa-miR417	21mer	GAATGTAGTGAATTTGTTCCA	0	0	0	0	0
osa-miR418	21mer	TAATGTGATGATGAAATGACG	0	0	0	0	0
osa-miR419	21mer	TGATGAATGCTGACGATGTTG	0	0	0	0	0
osa-miR420	21mer	TAAATTAATCACGGAAATGAT	0	0	0	0	0
osa-miR426	21mer	TTTTGGAAGTTTGTCCTTACG	0	0	0	0	0
osa-miR435	20mer	TTATCCGGTATTGGAGTTGA	0.8	7.4	0	0.3	0
osa-miR437	21mer	AAAGTTAGAGAAGTTTGACTT	0	0	0	0	0
osa-miR438	21mer	TTCCCACGCGTTATAGTGAAA	0	0	0	0	0
osa-miR439abcdefghij	21mer	TGTCGAACCGCGGTTGTTCGA	0	0	0	0	0
osa-miR440	24mer	AGTGTCTCCTGATGATCGGGACAA	0	0	0	0.7	2.4
osa-miR441abc	24mer	TACCATCAATATAAATGTGGGAAA	0	0	0	0	0
osa-miR442	24mer	TGACGTGTAAATTGCGAGACGAAT	0	0	0	0	0
osa-miR443	22mer	ATCACAATACAATAAATCTGGA	0	0	0	0	0
osa-miR444	21mer	TTGCTGCCTCAAGCTTGCTGC	0	0	0	0	0
osa-miR445abcdefghi	24mer	TAAATTAGTGTATAAACATCCGAT	0	0	0	0	0
osa-miR446	24mer	CATCAATATGAATATGGGAAATGG	0	0	0	0	0
osa-miR528	21mer	TGGAAGGGGCATGCAGAGGAG	199.9	210.7	18.3	3.2	32.6
osa-miR529	20mer	CTGTACCCTCTCTCTTCTTC	0	0	0	0	0
osa-miR530	21mer	AGGTGCAGAGGCAGATGCAAC	52	161.1	11.8	6	31.6
osa-miR531	24mer	CTCGCCGGGGCTGCGTGCCGCCAT	0	0	0	0.3	0
osa-miR535	21mer	TGACAACGAGAGAGAGCACGC	0.8	0	2.3	1.4	2.4